J5_6XHY_014

3D structure

PDB id

6XHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

6XHY|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHY|1|2A|C|601
6XHY|1|2A|G|602
6XHY|1|2A|A|603
6XHY|1|2A|G|604
*
6XHY|1|2A|C|624
6XHY|1|2A|G|625
6XHY|1|2A|U|626
6XHY|1|2A|A|627
6XHY|1|2A|G|628
*
6XHY|1|2A|C|635
6XHY|1|2A|G|636
6XHY|1|2A|A|637
6XHY|1|2A|G|638
*
6XHY|1|2A|C|650
6XHY|1|2A|G|651
6XHY|1|2A|C|652
6XHY|1|2A|A|652|||A
6XHY|1|2A|A|652|||B
6XHY|1|2A|G|652|||C
*
6XHY|1|2A|C|652|||V
6XHY|1|2A|A|653
6XHY|1|2A|A|654
6XHY|1|2A|A|655
6XHY|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15