J5_6XQE_019
3D structure
- PDB id
- 6XQE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAGG*CCAC*GGCAG
- Length
- 25 nucleotides
- Bulged bases
- 6XQE|1|2a|A|109, 6XQE|1|2a|C|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XQE|1|2a|C|58
6XQE|1|2a|A|59
6XQE|1|2a|A|60
6XQE|1|2a|G|61
*
6XQE|1|2a|C|106
6XQE|1|2a|G|107
6XQE|1|2a|G|108
6XQE|1|2a|A|109
6XQE|1|2a|C|110
6XQE|1|2a|G|111
6XQE|1|2a|G|112
6XQE|1|2a|G|113
*
6XQE|1|2a|C|314
6XQE|1|2a|A|315
6XQE|1|2a|G|316
6XQE|1|2a|G|317
*
6XQE|1|2a|C|336
6XQE|1|2a|C|337
6XQE|1|2a|A|338
6XQE|1|2a|C|339
*
6XQE|1|2a|G|350
6XQE|1|2a|G|351
6XQE|1|2a|C|352
6XQE|1|2a|A|353
6XQE|1|2a|G|354
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2O
- 50S ribosomal protein L14
- Chain 2p
- 30S ribosomal protein S16
- Chain 2t
- 30S ribosomal protein S20
Coloring options: