J5_6Y0G_011
3D structure
- PDB id
- 6Y0G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in classical-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUGUCU*AAAAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG
- Length
- 39 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Y0G|1|S2|C|30
6Y0G|1|S2|U|31
6Y0G|1|S2|U|32
6Y0G|1|S2|G|33
6Y0G|1|S2|U|34
6Y0G|1|S2|C|35
6Y0G|1|S2|U|36
*
6Y0G|1|S2|A|519
6Y0G|1|S2|A|520
6Y0G|1|S2|A|521
6Y0G|1|S2|A|522
6Y0G|1|S2|A|523
6Y0G|1|S2|U|524
6Y0G|1|S2|A|525
6Y0G|1|S2|A|526
6Y0G|1|S2|C|527
*
6Y0G|1|S2|G|558
6Y0G|1|S2|G|559
6Y0G|1|S2|A|560
6Y0G|1|S2|A|561
6Y0G|1|S2|U|562
6Y0G|1|S2|G|563
6Y0G|1|S2|A|564
6Y0G|1|S2|G|565
*
6Y0G|1|S2|C|585
6Y0G|1|S2|G|586
6Y0G|1|S2|A|587
6Y0G|1|S2|G|588
6Y0G|1|S2|G|589
6Y0G|1|S2|A|590
6Y0G|1|S2|U|591
6Y0G|1|S2|C|592
6Y0G|1|S2|C|593
6Y0G|1|S2|A|594
6Y0G|1|S2|U|595
*
6Y0G|1|S2|A|641
6Y0G|1|S2|U|642
6Y0G|1|S2|A|643
6Y0G|1|S2|G|644
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- 40S ribosomal protein S9
- Chain SX
- 40S ribosomal protein S23
- Chain SY
- 40S ribosomal protein S24
- Chain Se
- 40S ribosomal protein S30
Coloring options: