J5_6Y2L_008

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

6Y2L|1|S2|G|126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y2L|1|S2|G|123
6Y2L|1|S2|U|124
6Y2L|1|S2|C|125
6Y2L|1|S2|G|126
6Y2L|1|S2|C|127
6Y2L|1|S2|U|128
6Y2L|1|S2|C|129
*
6Y2L|1|S2|G|183
6Y2L|1|S2|G|184
6Y2L|1|S2|G|185
*
6Y2L|1|S2|U|214
6Y2L|1|S2|G|215
*
6Y2L|1|S2|C|310
6Y2L|1|S2|C|311
6Y2L|1|S2|G|312
*
6Y2L|1|S2|C|337
6Y2L|1|S2|G|338
6Y2L|1|S2|A|339
6Y2L|1|S2|C|340
6Y2L|1|S2|C|341

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8