J5_6ZS9_003

3D structure

PDB id

6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with ribosome recycling factor

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

AGAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUUU

Length

35 nucleotides

Bulged bases

6ZS9|1|XA|A|2725, 6ZS9|1|XA|A|2935, 6ZS9|1|XA|A|2990, 6ZS9|1|XA|U|3096, 6ZS9|1|XA|U|3097

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZS9|1|XA|A|2720
6ZS9|1|XA|G|2721
6ZS9|1|XA|A|2722
6ZS9|1|XA|A|2723
6ZS9|1|XA|G|2724
6ZS9|1|XA|A|2725
6ZS9|1|XA|C|2726
6ZS9|1|XA|C|2727
*
6ZS9|1|XA|G|2933
6ZS9|1|XA|G|2934
6ZS9|1|XA|A|2935
6ZS9|1|XA|U|2936
6ZS9|1|XA|A|2937
6ZS9|1|XA|A|2938
6ZS9|1|XA|C|2939
6ZS9|1|XA|A|2940
*
6ZS9|1|XA|U|2987
6ZS9|1|XA|C|2988
6ZS9|1|XA|G|2989
6ZS9|1|XA|A|2990
6ZS9|1|XA|U|2991
6ZS9|1|XA|G|2992
6ZS9|1|XA|U|2993
*
6ZS9|1|XA|G|3070
6ZS9|1|XA|U|3071
6ZS9|1|XA|U|3072
6ZS9|1|XA|C|3073
6ZS9|1|XA|A|3074
6ZS9|1|XA|G|3075
*
6ZS9|1|XA|C|3093
6ZS9|1|XA|G|3094
6ZS9|1|XA|G|3095
6ZS9|1|XA|U|3096
6ZS9|1|XA|U|3097
6ZS9|1|XA|U|3098

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain XE

39S ribosomal protein L3, mitochondrial

Chain XF

39S ribosomal protein L4, mitochondrial

Chain XM

39S ribosomal protein L15, mitochondrial

Chain XN

39S ribosomal protein L16, mitochondrial