Loop J5_6ZSA

3D structure

PDB id: 6ZSA (explore in PDB, NAKB, or RNA 3D Hub)
Description: Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å

Loop

Sequence: AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
Length: 37 nucleotides
Bulged bases: 6ZSA|1|XA|A|2725, 6ZSA|1|XA|A|2935, 6ZSA|1|XA|U|3096, 6ZSA|1|XA|U|3097
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6ZSA|1|XA|A|2720
6ZSA|1|XA|G|2721
6ZSA|1|XA|A|2722
6ZSA|1|XA|A|2723
6ZSA|1|XA|G|2724
6ZSA|1|XA|A|2725
6ZSA|1|XA|C|2726
6ZSA|1|XA|C|2727
*
6ZSA|1|XA|G|2933
6ZSA|1|XA|G|2934
6ZSA|1|XA|A|2935
6ZSA|1|XA|U|2936
6ZSA|1|XA|A|2937
6ZSA|1|XA|A|2938
6ZSA|1|XA|C|2939
6ZSA|1|XA|A|2940
*
6ZSA|1|XA|U|2987
6ZSA|1|XA|C|2988
6ZSA|1|XA|G|2989
6ZSA|1|XA|A|2990
6ZSA|1|XA|U|2991
6ZSA|1|XA|G|2992
6ZSA|1|XA|U|2993
6ZSA|1|XA|U|2994
*
6ZSA|1|XA|A|3069
6ZSA|1|XA|G|3070
6ZSA|1|XA|U|3071
6ZSA|1|XA|U|3072
6ZSA|1|XA|C|3073
6ZSA|1|XA|A|3074
6ZSA|1|XA|G|3075
*
6ZSA|1|XA|C|3093
6ZSA|1|XA|G|3094
6ZSA|1|XA|G|3095
6ZSA|1|XA|U|3096
6ZSA|1|XA|U|3097
6ZSA|1|XA|U|3098

Current chains

Chain XA: 16S rRNA

Nearby chains

Chain 0: 39S ribosomal protein L32, mitochondrial
Chain XE: 39S ribosomal protein L3, mitochondrial
Chain XF: 39S ribosomal protein L4, mitochondrial
Chain XM: 39S ribosomal protein L15, mitochondrial
Chain XN: 39S ribosomal protein L16, mitochondrial

J5_6ZSA_003