J5_6ZSC_003

3D structure

PDB id

6ZSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUUU

Length

35 nucleotides

Bulged bases

6ZSC|1|XA|A|2725, 6ZSC|1|XA|A|2935, 6ZSC|1|XA|G|2992, 6ZSC|1|XA|U|3096, 6ZSC|1|XA|U|3097

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZSC|1|XA|A|2720
6ZSC|1|XA|G|2721
6ZSC|1|XA|A|2722
6ZSC|1|XA|A|2723
6ZSC|1|XA|G|2724
6ZSC|1|XA|A|2725
6ZSC|1|XA|C|2726
6ZSC|1|XA|C|2727
*
6ZSC|1|XA|G|2933
6ZSC|1|XA|G|2934
6ZSC|1|XA|A|2935
6ZSC|1|XA|U|2936
6ZSC|1|XA|A|2937
6ZSC|1|XA|A|2938
6ZSC|1|XA|C|2939
6ZSC|1|XA|A|2940
*
6ZSC|1|XA|U|2987
6ZSC|1|XA|C|2988
6ZSC|1|XA|G|2989
6ZSC|1|XA|A|2990
6ZSC|1|XA|U|2991
6ZSC|1|XA|G|2992
6ZSC|1|XA|U|2993
*
6ZSC|1|XA|G|3070
6ZSC|1|XA|U|3071
6ZSC|1|XA|U|3072
6ZSC|1|XA|C|3073
6ZSC|1|XA|A|3074
6ZSC|1|XA|G|3075
*
6ZSC|1|XA|C|3093
6ZSC|1|XA|G|3094
6ZSC|1|XA|G|3095
6ZSC|1|XA|U|3096
6ZSC|1|XA|U|3097
6ZSC|1|XA|U|3098

Current chains

Chain XA

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain XE

39S ribosomal protein L3, mitochondrial

Chain XF

39S ribosomal protein L4, mitochondrial

Chain XM

39S ribosomal protein L15, mitochondrial

Chain XN

39S ribosomal protein L16, mitochondrial