J5_6ZSD_002
3D structure
- PDB id
- 6ZSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUAGAAAUAAC*GACCC*GUUG*CCAAU*AAGAACUAAUG
- Length
- 36 nucleotides
- Bulged bases
- 6ZSD|1|XA|A|1869, 6ZSD|1|XA|G|2292, 6ZSD|1|XA|U|2296, 6ZSD|1|XA|A|2297, 6ZSD|1|XA|U|2299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZSD|1|XA|C|1865
6ZSD|1|XA|U|1866
6ZSD|1|XA|A|1867
6ZSD|1|XA|G|1868
6ZSD|1|XA|A|1869
6ZSD|1|XA|A|1870
6ZSD|1|XA|A|1871
6ZSD|1|XA|U|1872
6ZSD|1|XA|A|1873
6ZSD|1|XA|A|1874
6ZSD|1|XA|C|1875
*
6ZSD|1|XA|G|1899
6ZSD|1|XA|A|1900
6ZSD|1|XA|C|1901
6ZSD|1|XA|C|1902
6ZSD|1|XA|C|1903
*
6ZSD|1|XA|G|2019
6ZSD|1|XA|U|2020
6ZSD|1|XA|U|2021
6ZSD|1|XA|G|2022
*
6ZSD|1|XA|C|2271
6ZSD|1|XA|C|2272
6ZSD|1|XA|A|2273
6ZSD|1|XA|A|2274
6ZSD|1|XA|U|2275
*
6ZSD|1|XA|A|2290
6ZSD|1|XA|A|2291
6ZSD|1|XA|G|2292
6ZSD|1|XA|A|2293
6ZSD|1|XA|A|2294
6ZSD|1|XA|C|2295
6ZSD|1|XA|U|2296
6ZSD|1|XA|A|2297
6ZSD|1|XA|A|2298
6ZSD|1|XA|U|2299
6ZSD|1|XA|G|2300
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain XF
- 39S ribosomal protein L4, mitochondrial
- Chain XM
- 39S ribosomal protein L15, mitochondrial
- Chain XR
- 39S ribosomal protein L20, mitochondrial
- Chain XS
- 39S ribosomal protein L21, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: