J5_6ZSD_003
3D structure
- PDB id
- 6ZSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUUU
- Length
- 35 nucleotides
- Bulged bases
- 6ZSD|1|XA|A|2725, 6ZSD|1|XA|A|2935, 6ZSD|1|XA|G|2992, 6ZSD|1|XA|U|3096, 6ZSD|1|XA|U|3097
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZSD|1|XA|A|2720
6ZSD|1|XA|G|2721
6ZSD|1|XA|A|2722
6ZSD|1|XA|A|2723
6ZSD|1|XA|G|2724
6ZSD|1|XA|A|2725
6ZSD|1|XA|C|2726
6ZSD|1|XA|C|2727
*
6ZSD|1|XA|G|2933
6ZSD|1|XA|G|2934
6ZSD|1|XA|A|2935
6ZSD|1|XA|U|2936
6ZSD|1|XA|A|2937
6ZSD|1|XA|A|2938
6ZSD|1|XA|C|2939
6ZSD|1|XA|A|2940
*
6ZSD|1|XA|U|2987
6ZSD|1|XA|C|2988
6ZSD|1|XA|G|2989
6ZSD|1|XA|A|2990
6ZSD|1|XA|U|2991
6ZSD|1|XA|G|2992
6ZSD|1|XA|U|2993
*
6ZSD|1|XA|G|3070
6ZSD|1|XA|U|3071
6ZSD|1|XA|U|3072
6ZSD|1|XA|C|3073
6ZSD|1|XA|A|3074
6ZSD|1|XA|G|3075
*
6ZSD|1|XA|C|3093
6ZSD|1|XA|G|3094
6ZSD|1|XA|G|3095
6ZSD|1|XA|U|3096
6ZSD|1|XA|U|3097
6ZSD|1|XA|U|3098
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain 0
- 39S ribosomal protein L32, mitochondrial
- Chain XE
- 39S ribosomal protein L3, mitochondrial
- Chain XF
- 39S ribosomal protein L4, mitochondrial
- Chain XM
- 39S ribosomal protein L15, mitochondrial
- Chain XN
- 39S ribosomal protein L16, mitochondrial
- Chain XT
- 39S ribosomal protein L22, mitochondrial
Coloring options: