J5_6ZTN_008
3D structure
- PDB id
- 6ZTN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAAGACC*GGA(H2U)AACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 6ZTN|1|BA|A|2062, 6ZTN|1|BA|A|2448, 6ZTN|1|BA|H2U|2449, 6ZTN|1|BA|U|2609
- QA status
- Modified nucleotides: H2U, 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZTN|1|BA|G|2057
6ZTN|1|BA|A|2058
6ZTN|1|BA|A|2059
6ZTN|1|BA|A|2060
6ZTN|1|BA|G|2061
6ZTN|1|BA|A|2062
6ZTN|1|BA|C|2063
6ZTN|1|BA|C|2064
*
6ZTN|1|BA|G|2446
6ZTN|1|BA|G|2447
6ZTN|1|BA|A|2448
6ZTN|1|BA|H2U|2449
6ZTN|1|BA|A|2450
6ZTN|1|BA|A|2451
6ZTN|1|BA|C|2452
6ZTN|1|BA|A|2453
*
6ZTN|1|BA|U|2500
6ZTN|1|BA|C|2501
6ZTN|1|BA|G|2502
6ZTN|1|BA|2MA|2503
6ZTN|1|BA|PSU|2504
6ZTN|1|BA|G|2505
6ZTN|1|BA|U|2506
6ZTN|1|BA|C|2507
*
6ZTN|1|BA|G|2582
6ZTN|1|BA|G|2583
6ZTN|1|BA|U|2584
6ZTN|1|BA|U|2585
6ZTN|1|BA|U|2586
6ZTN|1|BA|A|2587
6ZTN|1|BA|G|2588
*
6ZTN|1|BA|C|2606
6ZTN|1|BA|G|2607
6ZTN|1|BA|G|2608
6ZTN|1|BA|U|2609
6ZTN|1|BA|C|2610
6ZTN|1|BA|C|2611
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AW
- Transfer RNA; tRNA
- Chain AX
- Transfer RNA; tRNA
- Chain B2
- 50S ribosomal protein L32
- Chain BC
- 50S ribosomal protein L2
- Chain BD
- 50S ribosomal protein L3
- Chain BE
- 50S ribosomal protein L4
- Chain BM
- 50S ribosomal protein L15
- Chain BT
- 50S ribosomal protein L22
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