3D structure

PDB id
7A5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
4.33 Å

Loop

Sequence
CUAGAAAUAAC*GACCC*GUUG*CCAAU*AAGAACUAAUG
Length
36 nucleotides
Bulged bases
7A5G|1|A3|A|1869, 7A5G|1|A3|G|2292, 7A5G|1|A3|U|2299
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7A5G|1|A3|C|1865
7A5G|1|A3|U|1866
7A5G|1|A3|A|1867
7A5G|1|A3|G|1868
7A5G|1|A3|A|1869
7A5G|1|A3|A|1870
7A5G|1|A3|A|1871
7A5G|1|A3|U|1872
7A5G|1|A3|A|1873
7A5G|1|A3|A|1874
7A5G|1|A3|C|1875
*
7A5G|1|A3|G|1899
7A5G|1|A3|A|1900
7A5G|1|A3|C|1901
7A5G|1|A3|C|1902
7A5G|1|A3|C|1903
*
7A5G|1|A3|G|2019
7A5G|1|A3|U|2020
7A5G|1|A3|U|2021
7A5G|1|A3|G|2022
*
7A5G|1|A3|C|2271
7A5G|1|A3|C|2272
7A5G|1|A3|A|2273
7A5G|1|A3|A|2274
7A5G|1|A3|U|2275
*
7A5G|1|A3|A|2290
7A5G|1|A3|A|2291
7A5G|1|A3|G|2292
7A5G|1|A3|A|2293
7A5G|1|A3|A|2294
7A5G|1|A3|C|2295
7A5G|1|A3|U|2296
7A5G|1|A3|A|2297
7A5G|1|A3|A|2298
7A5G|1|A3|U|2299
7A5G|1|A3|G|2300

Current chains

Chain A3
16S rRNA

Nearby chains

Chain 33
39S ribosomal protein L35, mitochondrial
Chain 63
39S ribosomal protein L38, mitochondrial
Chain F3
39S ribosomal protein L4, mitochondrial
Chain M3
39S ribosomal protein L15, mitochondrial
Chain R3
39S ribosomal protein L20, mitochondrial
Chain S3
39S ribosomal protein L21, mitochondrial
Chain b3
39S ribosomal protein L43, mitochondrial
Chain c3
39S ribosomal protein L44, mitochondrial
Chain g3
39S ribosomal protein L49, mitochondrial
Chain i3
39S ribosomal protein L51, mitochondrial

Coloring options:

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