J5_7ACR_005
3D structure
- PDB id
- 7ACR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.44 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7ACR|1|1|A|2062, 7ACR|1|1|A|2448, 7ACR|1|1|U|2449, 7ACR|1|1|G|2505, 7ACR|1|1|U|2506, 7ACR|1|1|U|2609, 7ACR|1|1|C|2610
- QA status
- Modified nucleotides: 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ACR|1|1|G|2057
7ACR|1|1|A|2058
7ACR|1|1|A|2059
7ACR|1|1|A|2060
7ACR|1|1|G|2061
7ACR|1|1|A|2062
7ACR|1|1|C|2063
7ACR|1|1|C|2064
*
7ACR|1|1|G|2446
7ACR|1|1|G|2447
7ACR|1|1|A|2448
7ACR|1|1|U|2449
7ACR|1|1|A|2450
7ACR|1|1|A|2451
7ACR|1|1|C|2452
7ACR|1|1|A|2453
*
7ACR|1|1|U|2500
7ACR|1|1|C|2501
7ACR|1|1|G|2502
7ACR|1|1|2MA|2503
7ACR|1|1|PSU|2504
7ACR|1|1|G|2505
7ACR|1|1|U|2506
7ACR|1|1|C|2507
*
7ACR|1|1|G|2582
7ACR|1|1|G|2583
7ACR|1|1|U|2584
7ACR|1|1|U|2585
7ACR|1|1|U|2586
7ACR|1|1|A|2587
7ACR|1|1|G|2588
*
7ACR|1|1|C|2606
7ACR|1|1|G|2607
7ACR|1|1|G|2608
7ACR|1|1|U|2609
7ACR|1|1|C|2610
7ACR|1|1|C|2611
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 4
- Transfer-messenger RNA; tmRNA
- Chain B
- 50S ribosomal protein L2
- Chain C
- 50S ribosomal protein L3
- Chain D
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain S
- 50S ribosomal protein L22
- Chain W
- Nascent peptide
- Chain b
- 50S ribosomal protein L32
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