3D structure

PDB id
7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CCAAAC*GGGUUGUA*UGAGUAC*GGAAUCCG*CAAG
Length
33 nucleotides
Bulged bases
7AS8|1|A|U|301, 7AS8|1|A|C|452
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AS8|1|A|C|271
7AS8|1|A|C|272
7AS8|1|A|A|273
7AS8|1|A|A|274
7AS8|1|A|A|275
7AS8|1|A|C|276
*
7AS8|1|A|G|295
7AS8|1|A|G|296
7AS8|1|A|G|297
7AS8|1|A|U|298
7AS8|1|A|U|299
7AS8|1|A|G|300
7AS8|1|A|U|301
7AS8|1|A|A|302
*
7AS8|1|A|U|416
7AS8|1|A|G|417
7AS8|1|A|A|418
7AS8|1|A|G|419
7AS8|1|A|U|420
7AS8|1|A|A|421
7AS8|1|A|C|422
*
7AS8|1|A|G|446
7AS8|1|A|G|447
7AS8|1|A|A|448
7AS8|1|A|A|449
7AS8|1|A|U|450
7AS8|1|A|C|451
7AS8|1|A|C|452
7AS8|1|A|G|453
*
7AS8|1|A|C|468
7AS8|1|A|A|469
7AS8|1|A|A|470
7AS8|1|A|G|471

Current chains

Chain A
23S rRNA

Nearby chains

Chain b
50S ribosomal protein L28

Coloring options:

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