3D structure

PDB id
7ASP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 70S after 50 minutes incubation at 37C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
GC*GCACACC*GGAGGAAGAGAAAGAAAAUUCGAUUC*GAAGAG*CUAAAUAC
Length
49 nucleotides
Bulged bases
7ASP|1|Y|A|225, 7ASP|1|Y|A|231
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASP|1|Y|G|45
7ASP|1|Y|C|46
*
7ASP|1|Y|G|181
7ASP|1|Y|C|182
7ASP|1|Y|A|183
7ASP|1|Y|C|184
7ASP|1|Y|A|185
7ASP|1|Y|C|186
7ASP|1|Y|C|187
*
7ASP|1|Y|G|214
7ASP|1|Y|G|215
7ASP|1|Y|A|216
7ASP|1|Y|G|217
7ASP|1|Y|G|218
7ASP|1|Y|A|219
7ASP|1|Y|A|220
7ASP|1|Y|G|221
7ASP|1|Y|A|222
7ASP|1|Y|G|223
7ASP|1|Y|A|224
7ASP|1|Y|A|225
7ASP|1|Y|A|226
7ASP|1|Y|G|227
7ASP|1|Y|A|228
7ASP|1|Y|A|229
7ASP|1|Y|A|230
7ASP|1|Y|A|231
7ASP|1|Y|U|232
7ASP|1|Y|U|233
7ASP|1|Y|C|234
7ASP|1|Y|G|235
7ASP|1|Y|A|236
7ASP|1|Y|U|237
7ASP|1|Y|U|238
7ASP|1|Y|C|239
*
7ASP|1|Y|G|264
7ASP|1|Y|A|265
7ASP|1|Y|A|266
7ASP|1|Y|G|267
7ASP|1|Y|A|268
7ASP|1|Y|G|269
*
7ASP|1|Y|C|472
7ASP|1|Y|U|473
7ASP|1|Y|A|474
7ASP|1|Y|A|475
7ASP|1|Y|A|476
7ASP|1|Y|U|477
7ASP|1|Y|A|478
7ASP|1|Y|C|479

Current chains

Chain Y
23S rRNA

Nearby chains

Chain B
50S ribosomal protein L34
Chain J
50S ribosomal protein L15

Coloring options:

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