J5_7ASP_003
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CCAAAC*GGGGUUGUA*UGAGUAC*GGAAUCUG*UAAG
- Length
- 34 nucleotides
- Bulged bases
- 7ASP|1|Y|U|301, 7ASP|1|Y|U|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASP|1|Y|C|271
7ASP|1|Y|C|272
7ASP|1|Y|A|273
7ASP|1|Y|A|274
7ASP|1|Y|A|275
7ASP|1|Y|C|276
*
7ASP|1|Y|G|294
7ASP|1|Y|G|295
7ASP|1|Y|G|296
7ASP|1|Y|G|297
7ASP|1|Y|U|298
7ASP|1|Y|U|299
7ASP|1|Y|G|300
7ASP|1|Y|U|301
7ASP|1|Y|A|302
*
7ASP|1|Y|U|415
7ASP|1|Y|G|416
7ASP|1|Y|A|417
7ASP|1|Y|G|418
7ASP|1|Y|U|419
7ASP|1|Y|A|420
7ASP|1|Y|C|421
*
7ASP|1|Y|G|445
7ASP|1|Y|G|446
7ASP|1|Y|A|447
7ASP|1|Y|A|448
7ASP|1|Y|U|449
7ASP|1|Y|C|450
7ASP|1|Y|U|451
7ASP|1|Y|G|452
*
7ASP|1|Y|U|467
7ASP|1|Y|A|468
7ASP|1|Y|A|469
7ASP|1|Y|G|470
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain V
- 50S ribosomal protein L28
Coloring options: