J5_7AZS_009

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAAC*GAAAAG

Length

26 nucleotides

Bulged bases

7AZS|1|23SA|A|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZS|1|23SA|C|626
7AZS|1|23SA|G|627
7AZS|1|23SA|A|628
7AZS|1|23SA|G|629
*
7AZS|1|23SA|C|651
7AZS|1|23SA|G|652
7AZS|1|23SA|U|653
7AZS|1|23SA|A|654
7AZS|1|23SA|G|655
*
7AZS|1|23SA|C|662
7AZS|1|23SA|G|663
7AZS|1|23SA|A|664
7AZS|1|23SA|G|665
*
7AZS|1|23SA|C|677
7AZS|1|23SA|G|678
7AZS|1|23SA|C|679
7AZS|1|23SA|A|680
7AZS|1|23SA|A|681
7AZS|1|23SA|A|682
7AZS|1|23SA|C|683
*
7AZS|1|23SA|G|700
7AZS|1|23SA|A|701
7AZS|1|23SA|A|702
7AZS|1|23SA|A|703
7AZS|1|23SA|A|704
7AZS|1|23SA|G|705

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L15A

50S ribosomal protein L15

Chain L35A

50S ribosomal protein L35

Chain L4A

50S ribosomal protein L4