J5_7AZS_011
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCG(2MA)UGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 7AZS|1|23SA|A|2463, 7AZS|1|23SA|U|2464, 7AZS|1|23SA|U|2624
- QA status
- Modified nucleotides: 2MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AZS|1|23SA|A|2082
7AZS|1|23SA|A|2083
7AZS|1|23SA|A|2084
7AZS|1|23SA|A|2085
7AZS|1|23SA|G|2086
7AZS|1|23SA|A|2087
7AZS|1|23SA|C|2088
7AZS|1|23SA|C|2089
*
7AZS|1|23SA|G|2461
7AZS|1|23SA|G|2462
7AZS|1|23SA|A|2463
7AZS|1|23SA|U|2464
7AZS|1|23SA|A|2465
7AZS|1|23SA|A|2466
7AZS|1|23SA|C|2467
7AZS|1|23SA|A|2468
*
7AZS|1|23SA|U|2515
7AZS|1|23SA|C|2516
7AZS|1|23SA|G|2517
7AZS|1|23SA|2MA|2518
7AZS|1|23SA|U|2519
7AZS|1|23SA|G|2520
7AZS|1|23SA|U|2521
7AZS|1|23SA|C|2522
*
7AZS|1|23SA|G|2597
7AZS|1|23SA|G|2598
7AZS|1|23SA|U|2599
7AZS|1|23SA|U|2600
7AZS|1|23SA|C|2601
7AZS|1|23SA|A|2602
7AZS|1|23SA|G|2603
*
7AZS|1|23SA|C|2621
7AZS|1|23SA|G|2622
7AZS|1|23SA|G|2623
7AZS|1|23SA|U|2624
7AZS|1|23SA|C|2625
7AZS|1|23SA|U|2626
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain ASIA
- Transfer RNA; tRNA
- Chain L15A
- 50S ribosomal protein L15
- Chain L16A
- 50S ribosomal protein L16
- Chain L22A
- 50S ribosomal protein L22
- Chain L27A
- 50S ribosomal protein L27
- Chain L2A
- 50S ribosomal protein L2
- Chain L32A
- 50S ribosomal protein L32
- Chain L3A
- 50S ribosomal protein L3
- Chain L4A
- 50S ribosomal protein L4
- Chain PSIA
- Transfer RNA; tRNA
Coloring options: