J5_7AZY_001
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- AGG*CGAUGAAG*UGAACG*CG*CAU
- Length
- 22 nucleotides
- Bulged bases
- 7AZY|1|G|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7AZY_001 not in the Motif Atlas
- Homologous match to J5_8P9A_010
- Geometric discrepancy: 0.0575
- The information below is about J5_8P9A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_01737.2
- Basepair signature
- cWW-F-cWW-F-cWW-tSH-tHH-tHS-cWW-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7AZY|1|E|A|20
7AZY|1|E|G|21
7AZY|1|E|G|22
*
7AZY|1|G|C|35
7AZY|1|G|G|36
7AZY|1|G|A|37
7AZY|1|G|U|38
7AZY|1|G|G|39
7AZY|1|G|A|40
7AZY|1|G|A|41
7AZY|1|G|G|42
*
7AZY|1|G|U|102
7AZY|1|G|G|103
7AZY|1|G|A|104
7AZY|1|G|A|105
7AZY|1|G|C|106
7AZY|1|G|G|107
*
7AZY|1|G|C|115
7AZY|1|G|G|116
*
7AZY|1|G|C|137
7AZY|1|G|A|138
7AZY|1|G|U|139
Current chains
- Chain E
- 25S ribosomal RNA
- Chain G
- 5.8S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L35-A
- Chain I
- 60S ribosomal protein L25
- Chain M
- 60S ribosomal protein L39
- Chain R
- 60S ribosomal protein L15-A
- Chain g
- 60S ribosomal protein L37-A
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