J5_7AZY_006
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- UUGA*UUUG*CA*UG*CAGAAAA
- Length
- 19 nucleotides
- Bulged bases
- 7AZY|1|E|G|2418, 7AZY|1|E|A|2799, 7AZY|1|E|G|2800, 7AZY|1|E|A|2801, 7AZY|1|E|A|2802
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7AZY_006 not in the Motif Atlas
- Homologous match to J5_8P9A_015
- Geometric discrepancy: 0.2236
- The information below is about J5_8P9A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_08912.1
- Basepair signature
- cWW-cWH-cWH-tSS-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7AZY|1|E|U|2416
7AZY|1|E|U|2417
7AZY|1|E|G|2418
7AZY|1|E|A|2419
*
7AZY|1|E|U|2611
7AZY|1|E|U|2612
7AZY|1|E|U|2613
7AZY|1|E|G|2614
*
7AZY|1|E|C|2627
7AZY|1|E|A|2628
*
7AZY|1|E|U|2650
7AZY|1|E|G|2651
*
7AZY|1|E|C|2798
7AZY|1|E|A|2799
7AZY|1|E|G|2800
7AZY|1|E|A|2801
7AZY|1|E|A|2802
7AZY|1|E|A|2803
7AZY|1|E|A|2804
Current chains
- Chain E
- 25S ribosomal RNA
Nearby chains
- Chain Q
- 60S ribosomal protein L42-A
- Chain R
- 60S ribosomal protein L15-A
- Chain S
- 60S ribosomal protein L28
- Chain W
- 60S ribosomal protein L29
- Chain m
- 60S ribosomal protein L18-A
- Chain u
- 60S ribosomal protein L21-A
- Chain x
- 60S ribosomal protein L2-A
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