J5_7B7D_010
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 7B7D|1|LA|A|2404, 7B7D|1|LA|A|2817, 7B7D|1|LA|U|2978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B7D|1|LA|A|2399
7B7D|1|LA|G|2400
7B7D|1|LA|A|2401
7B7D|1|LA|A|2402
7B7D|1|LA|G|2403
7B7D|1|LA|A|2404
7B7D|1|LA|C|2405
7B7D|1|LA|C|2406
*
7B7D|1|LA|G|2815
7B7D|1|LA|G|2816
7B7D|1|LA|A|2817
7B7D|1|LA|U|2818
7B7D|1|LA|A|2819
7B7D|1|LA|A|2820
7B7D|1|LA|C|2821
7B7D|1|LA|U|2822
7B7D|1|LA|G|2823
*
7B7D|1|LA|C|2867
7B7D|1|LA|U|2868
7B7D|1|LA|U|2869
7B7D|1|LA|C|2870
7B7D|1|LA|G|2871
7B7D|1|LA|A|2872
7B7D|1|LA|U|2873
7B7D|1|LA|G|2874
7B7D|1|LA|U|2875
7B7D|1|LA|C|2876
*
7B7D|1|LA|G|2951
7B7D|1|LA|G|2952
7B7D|1|LA|U|2953
7B7D|1|LA|U|2954
7B7D|1|LA|U|2955
7B7D|1|LA|A|2956
7B7D|1|LA|G|2957
*
7B7D|1|LA|U|2975
7B7D|1|LA|A|2976
7B7D|1|LA|G|2977
7B7D|1|LA|U|2978
7B7D|1|LA|U|2979
7B7D|1|LA|U|2980
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L2-A
- Chain LE
- 60S ribosomal protein L3
- Chain LF
- 60S ribosomal protein L4-A
- Chain LL
- 60S ribosomal protein L10
- Chain LR
- 60S ribosomal protein L17-A
- Chain LX
- 60S ribosomal protein L29
- Chain Sm
- Transfer RNA; tRNA
- Chain Sn
- Transfer RNA; tRNA
Coloring options: