J5_7B7D_014
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- ACUUUG*UUUCCUU*GACUUU*AUAGAAUAGG*UGAU
- Length
- 33 nucleotides
- Bulged bases
- 7B7D|1|2|U|639, 7B7D|1|2|U|694, 7B7D|1|2|C|696, 7B7D|1|2|C|697, 7B7D|1|2|U|742, 7B7D|1|2|U|813, 7B7D|1|2|G|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B7D|1|2|A|636
7B7D|1|2|C|637
7B7D|1|2|U|638
7B7D|1|2|U|639
7B7D|1|2|U|640
7B7D|1|2|G|641
*
7B7D|1|2|U|693
7B7D|1|2|U|694
7B7D|1|2|U|695
7B7D|1|2|C|696
7B7D|1|2|C|697
7B7D|1|2|U|698
7B7D|1|2|U|699
*
7B7D|1|2|G|739
7B7D|1|2|A|740
7B7D|1|2|C|741
7B7D|1|2|U|742
7B7D|1|2|U|743
7B7D|1|2|U|744
*
7B7D|1|2|A|807
7B7D|1|2|U|808
7B7D|1|2|A|809
7B7D|1|2|G|810
7B7D|1|2|A|811
7B7D|1|2|A|812
7B7D|1|2|U|813
7B7D|1|2|A|814
7B7D|1|2|G|815
7B7D|1|2|G|816
*
7B7D|1|2|U|857
7B7D|1|2|G|858
7B7D|1|2|A|859
7B7D|1|2|U|860
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain Ln
- 60S ribosomal protein L19-A
- Chain S
- 40S ribosomal protein S4-A
- Chain U
- 40S ribosomal protein S7-A
- Chain X
- 40S ribosomal protein S11-A
- Chain Y
- 40S ribosomal protein S13
- Chain b
- 40S ribosomal protein S22-A
Coloring options: