J5_7BL2_001

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAUC*GAGG

Length

24 nucleotides

Bulged bases

7BL2|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL2|1|A|C|47
7BL2|1|A|G|48
7BL2|1|A|A|49
7BL2|1|A|U|50
7BL2|1|A|G|51
7BL2|1|A|A|52
7BL2|1|A|A|53
7BL2|1|A|G|54
*
7BL2|1|A|C|116
7BL2|1|A|G|117
7BL2|1|A|A|118
7BL2|1|A|A|119
7BL2|1|A|U|120
7BL2|1|A|G|121
*
7BL2|1|A|C|130
7BL2|1|A|A|131
*
7BL2|1|A|U|148
7BL2|1|A|A|149
7BL2|1|A|U|150
7BL2|1|A|C|151
*
7BL2|1|A|G|175
7BL2|1|A|A|176
7BL2|1|A|G|177
7BL2|1|A|G|178

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain X

50S ribosomal protein L28