J5_7BL4_005
3D structure
- PDB id
- 7BL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGU*GUUUAG*CGGUCC
- Length
- 38 nucleotides
- Bulged bases
- 7BL4|1|A|A|2060, 7BL4|1|A|G|2061, 7BL4|1|A|A|2448, 7BL4|1|A|U|2449, 7BL4|1|A|U|2609, 7BL4|1|A|C|2610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7BL4|1|A|G|2057
7BL4|1|A|A|2058
7BL4|1|A|A|2059
7BL4|1|A|A|2060
7BL4|1|A|G|2061
7BL4|1|A|A|2062
7BL4|1|A|C|2063
7BL4|1|A|C|2064
*
7BL4|1|A|G|2446
7BL4|1|A|G|2447
7BL4|1|A|A|2448
7BL4|1|A|U|2449
7BL4|1|A|A|2450
7BL4|1|A|A|2451
7BL4|1|A|C|2452
7BL4|1|A|A|2453
7BL4|1|A|G|2454
*
7BL4|1|A|C|2498
7BL4|1|A|C|2499
7BL4|1|A|U|2500
7BL4|1|A|C|2501
7BL4|1|A|G|2502
7BL4|1|A|A|2503
7BL4|1|A|U|2504
7BL4|1|A|G|2505
7BL4|1|A|U|2506
*
7BL4|1|A|G|2583
7BL4|1|A|U|2584
7BL4|1|A|U|2585
7BL4|1|A|U|2586
7BL4|1|A|A|2587
7BL4|1|A|G|2588
*
7BL4|1|A|C|2606
7BL4|1|A|G|2607
7BL4|1|A|G|2608
7BL4|1|A|U|2609
7BL4|1|A|C|2610
7BL4|1|A|C|2611
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 9
- GTPase ObgE/CgtA
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
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