Loop J5_7C79

3D structure

PDB id: 7C79 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of yeast Ribonuclease MRP
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å

Loop

Sequence: CAAUUCGUAUG*UA*UAAGGAG*CUGCUUCUUGA*UUUCUUCG
Length: 39 nucleotides
Bulged bases: 7C79|1|A|U|99, 7C79|1|A|C|101, 7C79|1|A|U|103, 7C79|1|A|A|104, 7C79|1|A|U|105, 7C79|1|A|C|186, 7C79|1|A|U|188, 7C79|1|A|U|222, 7C79|1|A|U|223, 7C79|1|A|C|224, 7C79|1|A|U|225, 7C79|1|A|U|226, 7C79|1|A|C|227
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7C79|1|A|C|96
7C79|1|A|A|97
7C79|1|A|A|98
7C79|1|A|U|99
7C79|1|A|U|100
7C79|1|A|C|101
7C79|1|A|G|102
7C79|1|A|U|103
7C79|1|A|A|104
7C79|1|A|U|105
7C79|1|A|G|106
*
7C79|1|A|U|116
7C79|1|A|A|117
*
7C79|1|A|U|157
7C79|1|A|A|158
7C79|1|A|A|159
7C79|1|A|G|160
7C79|1|A|G|161
7C79|1|A|A|162
7C79|1|A|G|163
*
7C79|1|A|C|180
7C79|1|A|U|181
7C79|1|A|G|182
7C79|1|A|C|183
7C79|1|A|U|184
7C79|1|A|U|185
7C79|1|A|C|186
7C79|1|A|U|187
7C79|1|A|U|188
7C79|1|A|G|189
7C79|1|A|A|190
*
7C79|1|A|U|221
7C79|1|A|U|222
7C79|1|A|U|223
7C79|1|A|C|224
7C79|1|A|U|225
7C79|1|A|U|226
7C79|1|A|C|227
7C79|1|A|G|228

Current chains

Chain A: Ribonuclease MRP RNA subunit NME1

Nearby chains

Chain B: Ribonucleases P/MRP protein subunit POP1
Chain D: RNases MRP/P 32.9 kDa subunit
Chain L: Ribonuclease MRP protein subunit RMP1

J5_7C79_001