J5_7C79_002
3D structure
- PDB id
- 7C79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of yeast Ribonuclease MRP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CAAUUCGUAUG*UA*UAAGGA*UGCUUCUUGA*UUUCUUCG
- Length
- 37 nucleotides
- Bulged bases
- 7C79|1|A|U|99, 7C79|1|A|C|101, 7C79|1|A|U|103, 7C79|1|A|A|104, 7C79|1|A|U|105, 7C79|1|A|C|186, 7C79|1|A|U|188, 7C79|1|A|U|222, 7C79|1|A|U|223, 7C79|1|A|C|224, 7C79|1|A|U|225, 7C79|1|A|U|226, 7C79|1|A|C|227
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7C79|1|A|C|96
7C79|1|A|A|97
7C79|1|A|A|98
7C79|1|A|U|99
7C79|1|A|U|100
7C79|1|A|C|101
7C79|1|A|G|102
7C79|1|A|U|103
7C79|1|A|A|104
7C79|1|A|U|105
7C79|1|A|G|106
*
7C79|1|A|U|116
7C79|1|A|A|117
*
7C79|1|A|U|157
7C79|1|A|A|158
7C79|1|A|A|159
7C79|1|A|G|160
7C79|1|A|G|161
7C79|1|A|A|162
*
7C79|1|A|U|181
7C79|1|A|G|182
7C79|1|A|C|183
7C79|1|A|U|184
7C79|1|A|U|185
7C79|1|A|C|186
7C79|1|A|U|187
7C79|1|A|U|188
7C79|1|A|G|189
7C79|1|A|A|190
*
7C79|1|A|U|221
7C79|1|A|U|222
7C79|1|A|U|223
7C79|1|A|C|224
7C79|1|A|U|225
7C79|1|A|U|226
7C79|1|A|C|227
7C79|1|A|G|228
Current chains
- Chain A
- Ribonuclease MRP RNA subunit NME1
Nearby chains
- Chain B
- Ribonucleases P/MRP protein subunit POP1
- Chain D
- RNases MRP/P 32.9 kDa subunit
- Chain L
- Ribonuclease MRP protein subunit RMP1
Coloring options: