J5_7D6Z_006
3D structure
- PDB id
- 7D6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGG*CGUGUAUGAAGAAG*UGUAAAGUACUUUC*GAAG*CAAG
- Length
- 40 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D6Z|1|f|C|36
7D6Z|1|f|U|37
7D6Z|1|f|G|38
7D6Z|1|f|G|39
*
7D6Z|1|f|C|403
7D6Z|1|f|G|404
7D6Z|1|f|U|405
7D6Z|1|f|G|406
7D6Z|1|f|U|407
7D6Z|1|f|A|408
7D6Z|1|f|U|409
7D6Z|1|f|G|410
7D6Z|1|f|A|411
7D6Z|1|f|A|412
7D6Z|1|f|G|413
7D6Z|1|f|A|414
7D6Z|1|f|A|415
7D6Z|1|f|G|416
*
7D6Z|1|f|U|427
7D6Z|1|f|G|428
7D6Z|1|f|U|429
7D6Z|1|f|A|430
7D6Z|1|f|A|431
7D6Z|1|f|A|432
7D6Z|1|f|G|433
7D6Z|1|f|U|434
7D6Z|1|f|A|435
7D6Z|1|f|C|436
7D6Z|1|f|U|437
7D6Z|1|f|U|438
7D6Z|1|f|U|439
7D6Z|1|f|C|440
*
7D6Z|1|f|G|497
7D6Z|1|f|A|498
7D6Z|1|f|A|499
7D6Z|1|f|G|500
*
7D6Z|1|f|C|545
7D6Z|1|f|A|546
7D6Z|1|f|A|547
7D6Z|1|f|G|548
Current chains
- Chain f
- 16S ribosomal rRNA
Nearby chains
- Chain k
- 30S ribosomal protein S4
- Chain s
- 30S ribosomal protein S12
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