J5_7JQM_014

3D structure

PDB id

7JQM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

7JQM|1|2A|A|652|||A, 7JQM|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQM|1|2A|C|601
7JQM|1|2A|G|602
7JQM|1|2A|A|603
7JQM|1|2A|G|604
*
7JQM|1|2A|C|624
7JQM|1|2A|G|625
7JQM|1|2A|U|626
7JQM|1|2A|A|627
7JQM|1|2A|G|628
*
7JQM|1|2A|C|635
7JQM|1|2A|G|636
7JQM|1|2A|A|637
7JQM|1|2A|G|638
*
7JQM|1|2A|C|650
7JQM|1|2A|G|651
7JQM|1|2A|C|652
7JQM|1|2A|A|652|||A
7JQM|1|2A|A|652|||B
7JQM|1|2A|G|652|||C
*
7JQM|1|2A|C|652|||V
7JQM|1|2A|A|653
7JQM|1|2A|A|654
7JQM|1|2A|A|655
7JQM|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15