J5_7KGB_007
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- A(6MZ)AAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 7KGB|1|A|A|2686, 7KGB|1|A|U|2847
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7KGB|1|A|A|2295
7KGB|1|A|6MZ|2296
7KGB|1|A|A|2297
7KGB|1|A|A|2298
7KGB|1|A|G|2299
7KGB|1|A|A|2300
7KGB|1|A|C|2301
7KGB|1|A|C|2302
*
7KGB|1|A|G|2684
7KGB|1|A|G|2685
7KGB|1|A|A|2686
7KGB|1|A|U|2687
7KGB|1|A|A|2688
7KGB|1|A|A|2689
7KGB|1|A|C|2690
7KGB|1|A|A|2691
*
7KGB|1|A|U|2738
7KGB|1|A|C|2739
7KGB|1|A|G|2740
7KGB|1|A|A|2741
7KGB|1|A|U|2742
7KGB|1|A|G|2743
7KGB|1|A|U|2744
7KGB|1|A|C|2745
*
7KGB|1|A|G|2820
7KGB|1|A|G|2821
7KGB|1|A|U|2822
7KGB|1|A|U|2823
7KGB|1|A|U|2824
7KGB|1|A|A|2825
7KGB|1|A|G|2826
*
7KGB|1|A|C|2844
7KGB|1|A|G|2845
7KGB|1|A|G|2846
7KGB|1|A|U|2847
7KGB|1|A|C|2848
7KGB|1|A|U|2849
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
- Chain y
- Transfer RNA; tRNA
Coloring options: