J5_7LS1_005
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUGA*UUUG*CA*UG*CAGAAAAG
- Length
- 21 nucleotides
- Bulged bases
- 7LS1|1|A2|G|3578, 7LS1|1|A2|A|4028, 7LS1|1|A2|G|4029, 7LS1|1|A2|A|4030, 7LS1|1|A2|A|4031, 7LS1|1|A2|A|4032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|A2|C|3575
7LS1|1|A2|U|3576
7LS1|1|A2|U|3577
7LS1|1|A2|G|3578
7LS1|1|A2|A|3579
*
7LS1|1|A2|U|3840
7LS1|1|A2|U|3841
7LS1|1|A2|U|3842
7LS1|1|A2|G|3843
*
7LS1|1|A2|C|3856
7LS1|1|A2|A|3857
*
7LS1|1|A2|U|3879
7LS1|1|A2|G|3880
*
7LS1|1|A2|C|4027
7LS1|1|A2|A|4028
7LS1|1|A2|G|4029
7LS1|1|A2|A|4030
7LS1|1|A2|A|4031
7LS1|1|A2|A|4032
7LS1|1|A2|A|4033
7LS1|1|A2|G|4034
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain D2
- 60S ribosomal protein L8
- Chain H1
- 60S ribosomal protein L15
- Chain K2
- 60S ribosomal protein L18
- Chain N2
- 60S ribosomal protein L21
- Chain U2
- 60S ribosomal protein L27a
- Chain V2
- 60S ribosomal protein L29
- Chain i2
- 60S ribosomal protein L36a
- Chain n2
- Transfer RNA; tRNA
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