J5_7MSH_010
3D structure
- PDB id
- 7MSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UUCA*UUUAA*UUG*CG*CGGAUAAAA
- Length
- 23 nucleotides
- Bulged bases
- 7MSH|1|A|C|2313, 7MSH|1|A|G|2666, 7MSH|1|A|G|2667, 7MSH|1|A|A|2668, 7MSH|1|A|U|2669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MSH|1|A|U|2311
7MSH|1|A|U|2312
7MSH|1|A|C|2313
7MSH|1|A|A|2314
*
7MSH|1|A|U|2481
7MSH|1|A|U|2482
7MSH|1|A|U|2483
7MSH|1|A|A|2484
7MSH|1|A|A|2485
*
7MSH|1|A|U|2495
7MSH|1|A|U|2496
7MSH|1|A|G|2497
*
7MSH|1|A|C|2519
7MSH|1|A|G|2520
*
7MSH|1|A|C|2665
7MSH|1|A|G|2666
7MSH|1|A|G|2667
7MSH|1|A|A|2668
7MSH|1|A|U|2669
7MSH|1|A|A|2670
7MSH|1|A|A|2671
7MSH|1|A|A|2672
7MSH|1|A|A|2673
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33 2
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain X
- 50S ribosomal protein L28
- Chain x
- Energy-dependent translational throttle protein EttA
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