J5_7MT2_007

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

AAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCU

Length

37 nucleotides

Bulged bases

7MT2|1|A|A|2686, 7MT2|1|A|U|2687, 7MT2|1|A|U|2744, 7MT2|1|A|U|2847

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MT2|1|A|A|2295
7MT2|1|A|A|2296
7MT2|1|A|A|2297
7MT2|1|A|A|2298
7MT2|1|A|G|2299
7MT2|1|A|A|2300
7MT2|1|A|C|2301
7MT2|1|A|C|2302
*
7MT2|1|A|G|2684
7MT2|1|A|G|2685
7MT2|1|A|A|2686
7MT2|1|A|U|2687
7MT2|1|A|A|2688
7MT2|1|A|A|2689
7MT2|1|A|C|2690
7MT2|1|A|A|2691
*
7MT2|1|A|U|2738
7MT2|1|A|C|2739
7MT2|1|A|G|2740
7MT2|1|A|A|2741
7MT2|1|A|U|2742
7MT2|1|A|G|2743
7MT2|1|A|U|2744
7MT2|1|A|C|2745
*
7MT2|1|A|G|2820
7MT2|1|A|G|2821
7MT2|1|A|U|2822
7MT2|1|A|U|2823
7MT2|1|A|U|2824
7MT2|1|A|A|2825
7MT2|1|A|G|2826
*
7MT2|1|A|C|2844
7MT2|1|A|G|2845
7MT2|1|A|G|2846
7MT2|1|A|U|2847
7MT2|1|A|C|2848
7MT2|1|A|U|2849

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain C

50S ribosomal protein L2

Chain D

50S ribosomal protein L3

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15

Chain M

50S ribosomal protein L16

Chain S

50S ribosomal protein L22

Chain y

Transfer RNA; tRNA