J5_7N2V_008
3D structure
- PDB id
- 7N2V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GAAAGACC*GGA(H2U)AACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7N2V|1|23|A|2448, 7N2V|1|23|H2U|2449, 7N2V|1|23|U|2609
- QA status
- Modified nucleotides: H2U, 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7N2V|1|23|G|2057
7N2V|1|23|A|2058
7N2V|1|23|A|2059
7N2V|1|23|A|2060
7N2V|1|23|G|2061
7N2V|1|23|A|2062
7N2V|1|23|C|2063
7N2V|1|23|C|2064
*
7N2V|1|23|G|2446
7N2V|1|23|G|2447
7N2V|1|23|A|2448
7N2V|1|23|H2U|2449
7N2V|1|23|A|2450
7N2V|1|23|A|2451
7N2V|1|23|C|2452
7N2V|1|23|A|2453
*
7N2V|1|23|U|2500
7N2V|1|23|C|2501
7N2V|1|23|G|2502
7N2V|1|23|2MA|2503
7N2V|1|23|PSU|2504
7N2V|1|23|G|2505
7N2V|1|23|U|2506
7N2V|1|23|C|2507
*
7N2V|1|23|G|2582
7N2V|1|23|G|2583
7N2V|1|23|U|2584
7N2V|1|23|U|2585
7N2V|1|23|U|2586
7N2V|1|23|A|2587
7N2V|1|23|G|2588
*
7N2V|1|23|C|2606
7N2V|1|23|G|2607
7N2V|1|23|G|2608
7N2V|1|23|U|2609
7N2V|1|23|C|2610
7N2V|1|23|C|2611
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain LB
- 50S ribosomal protein L2
- Chain LC
- 50S ribosomal protein L3
- Chain LD
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L15
- Chain LP
- 50S ribosomal protein L16
- Chain LV
- 50S ribosomal protein L22
- Chain Lf
- 50S ribosomal protein L32
- Chain Pp
- Nascent peptide
- Chain Pt
- Transfer RNA; tRNA
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