J5_7N31_002

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J5_7N31_002 not in the Motif Atlas

Homologous match to J5_5J7L_002

Geometric discrepancy: 0.044

The information below is about J5_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J5_67416.1

Basepair signature

cWW-F-F-F-cWW-tHW-F-tHW-tSS-cWW-cHW-cWW-F-cWW-F-cWW-F-F

Number of instances in this motif group

1

Unit IDs

7N31|1|16|C|36
7N31|1|16|U|37
7N31|1|16|G|38
7N31|1|16|G|39
*
7N31|1|16|C|403
7N31|1|16|G|404
7N31|1|16|U|405
7N31|1|16|G|406
*
7N31|1|16|C|436
7N31|1|16|U|437
7N31|1|16|U|438
7N31|1|16|U|439
7N31|1|16|C|440
7N31|1|16|A|441
7N31|1|16|G|442
*
7N31|1|16|C|492
7N31|1|16|A|493
7N31|1|16|G|494
7N31|1|16|A|495
7N31|1|16|A|496
7N31|1|16|G|497
7N31|1|16|A|498
7N31|1|16|A|499
7N31|1|16|G|500
*
7N31|1|16|C|545
7N31|1|16|A|546
7N31|1|16|A|547
7N31|1|16|G|548

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SD

30S ribosomal protein S4

Chain SL

30S ribosomal protein S12