J5_7N31_004

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

7N31|1|23|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J5_7N31_004 not in the Motif Atlas

Homologous match to J5_5J7L_013

Geometric discrepancy: 0.0488

The information below is about J5_5J7L_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J5_01737.2

Basepair signature

cWW-F-cWW-F-cWW-tSH-tHH-tHS-cWW-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7N31|1|23|C|47
7N31|1|23|G|48
7N31|1|23|A|49
7N31|1|23|U|50
7N31|1|23|G|51
7N31|1|23|A|52
7N31|1|23|A|53
7N31|1|23|G|54
*
7N31|1|23|C|116
7N31|1|23|G|117
7N31|1|23|A|118
7N31|1|23|A|119
7N31|1|23|U|120
7N31|1|23|G|121
*
7N31|1|23|C|130
7N31|1|23|A|131
*
7N31|1|23|U|148
7N31|1|23|A|149
7N31|1|23|U|150
*
7N31|1|23|A|176
7N31|1|23|G|177
7N31|1|23|G|178

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Lh

50S ribosomal protein L34