J5_7NAV_003

3D structure

PDB id

7NAV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GCAAG*CGGACGGG*CAC*GAC*GGCAGC

Length

25 nucleotides

Bulged bases

7NAV|1|A|A|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NAV|1|A|G|57
7NAV|1|A|C|58
7NAV|1|A|A|59
7NAV|1|A|A|60
7NAV|1|A|G|61
*
7NAV|1|A|C|106
7NAV|1|A|G|107
7NAV|1|A|G|108
7NAV|1|A|A|109
7NAV|1|A|C|110
7NAV|1|A|G|111
7NAV|1|A|G|112
7NAV|1|A|G|113
*
7NAV|1|A|C|314
7NAV|1|A|A|315
7NAV|1|A|C|316
*
7NAV|1|A|G|337
7NAV|1|A|A|338
7NAV|1|A|C|339
*
7NAV|1|A|G|350
7NAV|1|A|G|351
7NAV|1|A|C|352
7NAV|1|A|A|353
7NAV|1|A|G|354
7NAV|1|A|C|355

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20