J5_7NFX_004
3D structure
- PDB id
- 7NFX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 7NFX|1|5|A|3908, 7NFX|1|5|A|4394, 7NFX|1|5|U|4395, 7NFX|1|5|U|4555, 7NFX|1|5|U|4556
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NFX|1|5|A|3903
7NFX|1|5|G|3904
7NFX|1|5|A|3905
7NFX|1|5|A|3906
7NFX|1|5|G|3907
7NFX|1|5|A|3908
7NFX|1|5|C|3909
7NFX|1|5|C|3910
*
7NFX|1|5|G|4392
7NFX|1|5|G|4393
7NFX|1|5|A|4394
7NFX|1|5|U|4395
7NFX|1|5|A|4396
7NFX|1|5|A|4397
7NFX|1|5|C|4398
7NFX|1|5|U|4399
7NFX|1|5|G|4400
*
7NFX|1|5|C|4444
7NFX|1|5|U|4445
7NFX|1|5|U|4446
7NFX|1|5|C|4447
7NFX|1|5|G|4448
7NFX|1|5|A|4449
7NFX|1|5|U|4450
7NFX|1|5|G|4451
7NFX|1|5|U|4452
7NFX|1|5|C|4453
*
7NFX|1|5|G|4528
7NFX|1|5|G|4529
7NFX|1|5|U|4530
7NFX|1|5|U|4531
7NFX|1|5|U|4532
7NFX|1|5|A|4533
7NFX|1|5|G|4534
*
7NFX|1|5|U|4552
7NFX|1|5|A|4553
7NFX|1|5|G|4554
7NFX|1|5|U|4555
7NFX|1|5|U|4556
7NFX|1|5|U|4557
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain B
- uL3
- Chain C
- 60S ribosomal protein L4
- Chain P
- uL22
- Chain a
- uL15
- Chain b
- 60S ribosomal protein L29
Coloring options: