J5_7NHL_006
3D structure
- PDB id
- 7NHL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGU*GUUCAG*CGGUCC
- Length
- 38 nucleotides
- Bulged bases
- 7NHL|1|A|A|2089, 7NHL|1|A|A|2475, 7NHL|1|A|U|2612, 7NHL|1|A|U|2636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NHL|1|A|G|2084
7NHL|1|A|A|2085
7NHL|1|A|A|2086
7NHL|1|A|A|2087
7NHL|1|A|G|2088
7NHL|1|A|A|2089
7NHL|1|A|C|2090
7NHL|1|A|C|2091
*
7NHL|1|A|G|2473
7NHL|1|A|G|2474
7NHL|1|A|A|2475
7NHL|1|A|U|2476
7NHL|1|A|A|2477
7NHL|1|A|A|2478
7NHL|1|A|C|2479
7NHL|1|A|A|2480
7NHL|1|A|G|2481
*
7NHL|1|A|C|2525
7NHL|1|A|C|2526
7NHL|1|A|U|2527
7NHL|1|A|C|2528
7NHL|1|A|G|2529
7NHL|1|A|A|2530
7NHL|1|A|U|2531
7NHL|1|A|G|2532
7NHL|1|A|U|2533
*
7NHL|1|A|G|2610
7NHL|1|A|U|2611
7NHL|1|A|U|2612
7NHL|1|A|C|2613
7NHL|1|A|A|2614
7NHL|1|A|G|2615
*
7NHL|1|A|C|2633
7NHL|1|A|G|2634
7NHL|1|A|G|2635
7NHL|1|A|U|2636
7NHL|1|A|C|2637
7NHL|1|A|C|2638
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- Lincosamide-streptogramin A resistance protein
- Chain 5
- 50S ribosomal protein L32
- Chain G
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L16
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