J5_7NHM_006
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7NHM|1|A|A|2089, 7NHM|1|A|A|2475, 7NHM|1|A|U|2636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NHM|1|A|G|2084
7NHM|1|A|A|2085
7NHM|1|A|A|2086
7NHM|1|A|A|2087
7NHM|1|A|G|2088
7NHM|1|A|A|2089
7NHM|1|A|C|2090
7NHM|1|A|C|2091
*
7NHM|1|A|G|2473
7NHM|1|A|G|2474
7NHM|1|A|A|2475
7NHM|1|A|U|2476
7NHM|1|A|A|2477
7NHM|1|A|A|2478
7NHM|1|A|C|2479
7NHM|1|A|A|2480
*
7NHM|1|A|U|2527
7NHM|1|A|C|2528
7NHM|1|A|G|2529
7NHM|1|A|A|2530
7NHM|1|A|U|2531
7NHM|1|A|G|2532
7NHM|1|A|U|2533
7NHM|1|A|C|2534
*
7NHM|1|A|G|2609
7NHM|1|A|G|2610
7NHM|1|A|U|2611
7NHM|1|A|U|2612
7NHM|1|A|C|2613
7NHM|1|A|A|2614
7NHM|1|A|G|2615
*
7NHM|1|A|C|2633
7NHM|1|A|G|2634
7NHM|1|A|G|2635
7NHM|1|A|U|2636
7NHM|1|A|C|2637
7NHM|1|A|C|2638
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L32
- Chain D
- Transfer RNA; tRNA
- Chain G
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L27
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