J5_7NHN_006
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 7NHN|1|A|A|2095, 7NHN|1|A|A|2481, 7NHN|1|A|U|2482, 7NHN|1|A|U|2618, 7NHN|1|A|U|2642
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NHN|1|A|G|2090
7NHN|1|A|A|2091
7NHN|1|A|A|2092
7NHN|1|A|A|2093
7NHN|1|A|G|2094
7NHN|1|A|A|2095
7NHN|1|A|C|2096
7NHN|1|A|C|2097
*
7NHN|1|A|G|2479
7NHN|1|A|G|2480
7NHN|1|A|A|2481
7NHN|1|A|U|2482
7NHN|1|A|A|2483
7NHN|1|A|A|2484
7NHN|1|A|C|2485
7NHN|1|A|A|2486
*
7NHN|1|A|U|2533
7NHN|1|A|C|2534
7NHN|1|A|G|2535
7NHN|1|A|A|2536
7NHN|1|A|U|2537
7NHN|1|A|G|2538
7NHN|1|A|U|2539
*
7NHN|1|A|G|2616
7NHN|1|A|U|2617
7NHN|1|A|U|2618
7NHN|1|A|C|2619
7NHN|1|A|A|2620
7NHN|1|A|G|2621
*
7NHN|1|A|C|2639
7NHN|1|A|G|2640
7NHN|1|A|G|2641
7NHN|1|A|U|2642
7NHN|1|A|C|2643
7NHN|1|A|C|2644
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- Lmo0919 protein
- Chain 5
- 50S ribosomal protein L32-2
- Chain G
- 50S ribosomal protein L2
- Chain H
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L4
- Chain O
- 50S ribosomal protein L15
- Chain P
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L22
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