J5_7NQH_001

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCAGAAAAAA*UACC*GUUG*CUAAU*AAGCAAUAAUG

Length

34 nucleotides

Bulged bases

7NQH|1|BA|A|205, 7NQH|1|BA|G|626, 7NQH|1|BA|U|633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NQH|1|BA|C|201
7NQH|1|BA|C|202
7NQH|1|BA|A|203
7NQH|1|BA|G|204
7NQH|1|BA|A|205
7NQH|1|BA|A|206
7NQH|1|BA|A|207
7NQH|1|BA|A|208
7NQH|1|BA|A|209
7NQH|1|BA|A|210
*
7NQH|1|BA|U|236
7NQH|1|BA|A|237
7NQH|1|BA|C|238
7NQH|1|BA|C|239
*
7NQH|1|BA|G|356
7NQH|1|BA|U|357
7NQH|1|BA|U|358
7NQH|1|BA|G|359
*
7NQH|1|BA|C|605
7NQH|1|BA|U|606
7NQH|1|BA|A|607
7NQH|1|BA|A|608
7NQH|1|BA|U|609
*
7NQH|1|BA|A|624
7NQH|1|BA|A|625
7NQH|1|BA|G|626
7NQH|1|BA|C|627
7NQH|1|BA|A|628
7NQH|1|BA|A|629
7NQH|1|BA|U|630
7NQH|1|BA|A|631
7NQH|1|BA|A|632
7NQH|1|BA|U|633
7NQH|1|BA|G|634

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B8

Mitochondrial ribosomal protein L35

Chain BF

Mitochondrial ribosomal protein L4

Chain BP

uL15m

Chain BU

Mitochondrial ribosomal protein L20

Chain BV

Mitochondrial ribosomal protein L21

Chain Bg

Mitochondrial ribosomal protein L43

Chain Bh

mL44

Chain Bl

Mrpl34

Chain Bn

Mitochondrial ribosomal protein L51