J5_7NQH_002
3D structure
- PDB id
- 7NQH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 7NQH|1|BA|A|1057, 7NQH|1|BA|A|1271, 7NQH|1|BA|U|1272, 7NQH|1|BA|G|1328, 7NQH|1|BA|U|1329, 7NQH|1|BA|U|1432, 7NQH|1|BA|U|1433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NQH|1|BA|A|1052
7NQH|1|BA|G|1053
7NQH|1|BA|A|1054
7NQH|1|BA|A|1055
7NQH|1|BA|G|1056
7NQH|1|BA|A|1057
7NQH|1|BA|C|1058
7NQH|1|BA|C|1059
*
7NQH|1|BA|G|1269
7NQH|1|BA|G|1270
7NQH|1|BA|A|1271
7NQH|1|BA|U|1272
7NQH|1|BA|A|1273
7NQH|1|BA|A|1274
7NQH|1|BA|C|1275
7NQH|1|BA|A|1276
*
7NQH|1|BA|U|1323
7NQH|1|BA|C|1324
7NQH|1|BA|G|1325
7NQH|1|BA|A|1326
7NQH|1|BA|U|1327
7NQH|1|BA|G|1328
7NQH|1|BA|U|1329
7NQH|1|BA|U|1330
*
7NQH|1|BA|A|1405
7NQH|1|BA|G|1406
7NQH|1|BA|U|1407
7NQH|1|BA|U|1408
7NQH|1|BA|C|1409
7NQH|1|BA|A|1410
7NQH|1|BA|G|1411
*
7NQH|1|BA|C|1429
7NQH|1|BA|G|1430
7NQH|1|BA|G|1431
7NQH|1|BA|U|1432
7NQH|1|BA|U|1433
7NQH|1|BA|U|1434
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain AV
- tRNAMet
- Chain B5
- bL32m
- Chain BE
- ICT1
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BL
- Peptide chain release factor 1-like, mitochondrial
- Chain BP
- uL15m
- Chain BQ
- uL16m
- Chain BW
- uL22m
- Chain Bi
- Mitochondrial ribosomal protein L45
Coloring options: