J5_7NQL_002
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGAAGACC*GGAUAACA*UCGAUGUU*AGUUCAG*CGGUUU
- Length
- 37 nucleotides
- Bulged bases
- 7NQL|1|BA|A|1057, 7NQL|1|BA|A|1271, 7NQL|1|BA|U|1272, 7NQL|1|BA|U|1432, 7NQL|1|BA|U|1433
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NQL|1|BA|A|1052
7NQL|1|BA|G|1053
7NQL|1|BA|A|1054
7NQL|1|BA|A|1055
7NQL|1|BA|G|1056
7NQL|1|BA|A|1057
7NQL|1|BA|C|1058
7NQL|1|BA|C|1059
*
7NQL|1|BA|G|1269
7NQL|1|BA|G|1270
7NQL|1|BA|A|1271
7NQL|1|BA|U|1272
7NQL|1|BA|A|1273
7NQL|1|BA|A|1274
7NQL|1|BA|C|1275
7NQL|1|BA|A|1276
*
7NQL|1|BA|U|1323
7NQL|1|BA|C|1324
7NQL|1|BA|G|1325
7NQL|1|BA|A|1326
7NQL|1|BA|U|1327
7NQL|1|BA|G|1328
7NQL|1|BA|U|1329
7NQL|1|BA|U|1330
*
7NQL|1|BA|A|1405
7NQL|1|BA|G|1406
7NQL|1|BA|U|1407
7NQL|1|BA|U|1408
7NQL|1|BA|C|1409
7NQL|1|BA|A|1410
7NQL|1|BA|G|1411
*
7NQL|1|BA|C|1429
7NQL|1|BA|G|1430
7NQL|1|BA|G|1431
7NQL|1|BA|U|1432
7NQL|1|BA|U|1433
7NQL|1|BA|U|1434
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain AV
- fMet-tRNAMet (P site)
- Chain B5
- bL32m
- Chain BE
- ICT1
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BL
- Peptidyl-tRNA hydrolase ICT1, mitochondrial
- Chain BP
- uL15m
- Chain BQ
- uL16m
- Chain BW
- uL22m
- Chain Bi
- Mitochondrial ribosomal protein L45
Coloring options: