J5_7NSI_001
3D structure
- PDB id
- 7NSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CCAGAAAAAA*UACC*GUUG*CUAAUC*GAAGCAAUAAUG
- Length
- 36 nucleotides
- Bulged bases
- 7NSI|1|BA|A|205, 7NSI|1|BA|G|626, 7NSI|1|BA|U|633
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NSI|1|BA|C|201
7NSI|1|BA|C|202
7NSI|1|BA|A|203
7NSI|1|BA|G|204
7NSI|1|BA|A|205
7NSI|1|BA|A|206
7NSI|1|BA|A|207
7NSI|1|BA|A|208
7NSI|1|BA|A|209
7NSI|1|BA|A|210
*
7NSI|1|BA|U|236
7NSI|1|BA|A|237
7NSI|1|BA|C|238
7NSI|1|BA|C|239
*
7NSI|1|BA|G|356
7NSI|1|BA|U|357
7NSI|1|BA|U|358
7NSI|1|BA|G|359
*
7NSI|1|BA|C|605
7NSI|1|BA|U|606
7NSI|1|BA|A|607
7NSI|1|BA|A|608
7NSI|1|BA|U|609
7NSI|1|BA|C|610
*
7NSI|1|BA|G|623
7NSI|1|BA|A|624
7NSI|1|BA|A|625
7NSI|1|BA|G|626
7NSI|1|BA|C|627
7NSI|1|BA|A|628
7NSI|1|BA|A|629
7NSI|1|BA|U|630
7NSI|1|BA|A|631
7NSI|1|BA|A|632
7NSI|1|BA|U|633
7NSI|1|BA|G|634
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B8
- 39S ribosomal protein L35, mitochondrial
- Chain BF
- Mitochondrial ribosomal protein L4
- Chain BP
- 39S ribosomal protein L15, mitochondrial
- Chain BU
- 39S ribosomal protein L20, mitochondrial isoform 1
- Chain BV
- 39S ribosomal protein L21, mitochondrial isoform d
- Chain Bg
- 39S ribosomal protein L43, mitochondrial isoform X2
- Chain Bh
- 39S ribosomal protein L44, mitochondrial
- Chain Bl
- 39S ribosomal protein L49, mitochondrial
- Chain Bn
- 39S ribosomal protein L51, mitochondrial
Coloring options: