J5_7NSO_001
3D structure
- PDB id
- 7NSO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGG*CG*UG*CUUA*UC
- Length
- 14 nucleotides
- Bulged bases
- 7NSO|1|8|U|8, 7NSO|1|8|G|9, 7NSO|1|8|U|59
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_7NSO_001 not in the Motif Atlas
- Homologous match to J5_2BTE_001
- Geometric discrepancy: 0.2404
- The information below is about J5_2BTE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_33809.1
- Basepair signature
- cWW-F-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7NSO|1|8|G|7
7NSO|1|8|U|8
7NSO|1|8|G|9
7NSO|1|8|G|10
*
7NSO|1|8|C|26
7NSO|1|8|G|27
*
7NSO|1|8|U|45
7NSO|1|8|G|46
*
7NSO|1|8|C|57
7NSO|1|8|U|58
7NSO|1|8|U|59
7NSO|1|8|A|60
*
7NSO|1|8|U|76
7NSO|1|8|C|77
Current chains
- Chain 8
- PtRNA-Leu
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
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