J5_7NSP_006
3D structure
- PDB id
- 7NSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 7NSP|1|A|A|2062, 7NSP|1|A|A|2448, 7NSP|1|A|U|2449, 7NSP|1|A|U|2609, 7NSP|1|A|C|2610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NSP|1|A|G|2057
7NSP|1|A|A|2058
7NSP|1|A|A|2059
7NSP|1|A|A|2060
7NSP|1|A|G|2061
7NSP|1|A|A|2062
7NSP|1|A|C|2063
7NSP|1|A|C|2064
*
7NSP|1|A|G|2446
7NSP|1|A|G|2447
7NSP|1|A|A|2448
7NSP|1|A|U|2449
7NSP|1|A|A|2450
7NSP|1|A|A|2451
7NSP|1|A|C|2452
7NSP|1|A|A|2453
*
7NSP|1|A|U|2500
7NSP|1|A|C|2501
7NSP|1|A|G|2502
7NSP|1|A|A|2503
7NSP|1|A|U|2504
7NSP|1|A|G|2505
7NSP|1|A|U|2506
7NSP|1|A|C|2507
*
7NSP|1|A|G|2582
7NSP|1|A|G|2583
7NSP|1|A|U|2584
7NSP|1|A|U|2585
7NSP|1|A|U|2586
7NSP|1|A|A|2587
7NSP|1|A|G|2588
*
7NSP|1|A|C|2606
7NSP|1|A|G|2607
7NSP|1|A|G|2608
7NSP|1|A|U|2609
7NSP|1|A|C|2610
7NSP|1|A|C|2611
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 7
- ermDL
- Chain 8
- Transfer RNA; tRNA
- Chain C
- 50S ribosomal protein L2
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
- Chain v
- Transfer RNA; tRNA
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