J5_7O1C_008
3D structure
- PDB id
- 7O1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCG(2MA)(PSU)GU*GUUUAG*CGGUCC
- Length
- 35 nucleotides
- Bulged bases
- 7O1C|1|BA|A|2448, 7O1C|1|BA|U|2609
- QA status
- Modified nucleotides: 2MA, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O1C|1|BA|G|2057
7O1C|1|BA|A|2058
7O1C|1|BA|A|2059
7O1C|1|BA|A|2060
7O1C|1|BA|G|2061
7O1C|1|BA|A|2062
7O1C|1|BA|C|2063
7O1C|1|BA|C|2064
*
7O1C|1|BA|G|2446
7O1C|1|BA|G|2447
7O1C|1|BA|A|2448
7O1C|1|BA|U|2449
7O1C|1|BA|A|2450
7O1C|1|BA|A|2451
7O1C|1|BA|C|2452
7O1C|1|BA|A|2453
*
7O1C|1|BA|U|2500
7O1C|1|BA|C|2501
7O1C|1|BA|G|2502
7O1C|1|BA|2MA|2503
7O1C|1|BA|PSU|2504
7O1C|1|BA|G|2505
7O1C|1|BA|U|2506
*
7O1C|1|BA|G|2583
7O1C|1|BA|U|2584
7O1C|1|BA|U|2585
7O1C|1|BA|U|2586
7O1C|1|BA|A|2587
7O1C|1|BA|G|2588
*
7O1C|1|BA|C|2606
7O1C|1|BA|G|2607
7O1C|1|BA|G|2608
7O1C|1|BA|U|2609
7O1C|1|BA|C|2610
7O1C|1|BA|C|2611
Current chains
- Chain BA
- Ribosomal RNA 23S
Nearby chains
- Chain B0
- 50S ribosomal protein L32
- Chain B5
- TnaC-(R23F) - Tryptophanase leader peptide
- Chain B8
- Transfer RNA; tRNA
- Chain B9
- Peptide chain release factor RF2
- Chain BC
- 50S ribosomal protein L2
- Chain BD
- 50S ribosomal protein L3
- Chain BE
- 50S ribosomal protein L4
- Chain BL
- 50S ribosomal protein L15
- Chain BS
- 50S ribosomal protein L22
Coloring options: