J5_7O9M_003
3D structure
- PDB id
- 7O9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- AAGAC*GAUAACAGCGCA*UUACGACCUCGAUGU*AGUUCAG*CGGUU
- Length
- 44 nucleotides
- Bulged bases
- 7O9M|1|A|A|2938, 7O9M|1|A|C|2942, 7O9M|1|A|G|2943, 7O9M|1|A|A|2984, 7O9M|1|A|G|2992, 7O9M|1|A|U|3096
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O9M|1|A|A|2722
7O9M|1|A|A|2723
7O9M|1|A|G|2724
7O9M|1|A|A|2725
7O9M|1|A|C|2726
*
7O9M|1|A|G|2934
7O9M|1|A|A|2935
7O9M|1|A|U|2936
7O9M|1|A|A|2937
7O9M|1|A|A|2938
7O9M|1|A|C|2939
7O9M|1|A|A|2940
7O9M|1|A|G|2941
7O9M|1|A|C|2942
7O9M|1|A|G|2943
7O9M|1|A|C|2944
7O9M|1|A|A|2945
*
7O9M|1|A|U|2979
7O9M|1|A|U|2980
7O9M|1|A|A|2981
7O9M|1|A|C|2982
7O9M|1|A|G|2983
7O9M|1|A|A|2984
7O9M|1|A|C|2985
7O9M|1|A|C|2986
7O9M|1|A|U|2987
7O9M|1|A|C|2988
7O9M|1|A|G|2989
7O9M|1|A|A|2990
7O9M|1|A|U|2991
7O9M|1|A|G|2992
7O9M|1|A|U|2993
*
7O9M|1|A|A|3069
7O9M|1|A|G|3070
7O9M|1|A|U|3071
7O9M|1|A|U|3072
7O9M|1|A|C|3073
7O9M|1|A|A|3074
7O9M|1|A|G|3075
*
7O9M|1|A|C|3093
7O9M|1|A|G|3094
7O9M|1|A|G|3095
7O9M|1|A|U|3096
7O9M|1|A|U|3097
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain A1
- 5-methylcytosine rRNA methyltransferase NSUN4
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain n
- rRNA methyltransferase 2, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: