J5_7OF1_004
3D structure
- PDB id
- 7OF1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAGUCGGCAAAAUAG*UG*UG*CGGACAAGG*CACUGUC
- Length
- 37 nucleotides
- Bulged bases
- 7OF1|1|1|U|1912, 7OF1|1|1|G|2116, 7OF1|1|1|G|2121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OF1|1|1|G|1898
7OF1|1|1|G|1899
7OF1|1|1|A|1900
7OF1|1|1|A|1901
7OF1|1|1|G|1902
7OF1|1|1|U|1903
7OF1|1|1|C|1904
7OF1|1|1|G|1905
7OF1|1|1|G|1906
7OF1|1|1|C|1907
7OF1|1|1|A|1908
7OF1|1|1|A|1909
7OF1|1|1|A|1910
7OF1|1|1|A|1911
7OF1|1|1|U|1912
7OF1|1|1|A|1913
7OF1|1|1|G|1914
*
7OF1|1|1|U|1938
7OF1|1|1|G|1939
*
7OF1|1|1|U|2109
7OF1|1|1|G|2110
*
7OF1|1|1|C|2114
7OF1|1|1|G|2115
7OF1|1|1|G|2116
7OF1|1|1|A|2117
7OF1|1|1|C|2118
7OF1|1|1|A|2119
7OF1|1|1|A|2120
7OF1|1|1|G|2121
7OF1|1|1|G|2122
*
7OF1|1|1|C|2331
7OF1|1|1|A|2332
7OF1|1|1|C|2333
7OF1|1|1|U|2334
7OF1|1|1|G|2335
7OF1|1|1|U|2336
7OF1|1|1|C|2337
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain R
- 60S ribosomal protein L19-A
- Chain V
- 60S ribosomal protein L23-A
- Chain m
- Nucleolar GTP-binding protein 2
- Chain u
- Ribosome biogenesis protein RLP24
Coloring options: