J5_7OF7_002
3D structure
- PDB id
- 7OF7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CUAGAAAUAAC*GACCC*GUUG*CCAAU*AAGAACUAAUG
- Length
- 36 nucleotides
- Bulged bases
- 7OF7|1|A|A|1869, 7OF7|1|A|G|2292, 7OF7|1|A|U|2299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OF7|1|A|C|1865
7OF7|1|A|U|1866
7OF7|1|A|A|1867
7OF7|1|A|G|1868
7OF7|1|A|A|1869
7OF7|1|A|A|1870
7OF7|1|A|A|1871
7OF7|1|A|U|1872
7OF7|1|A|A|1873
7OF7|1|A|A|1874
7OF7|1|A|C|1875
*
7OF7|1|A|G|1899
7OF7|1|A|A|1900
7OF7|1|A|C|1901
7OF7|1|A|C|1902
7OF7|1|A|C|1903
*
7OF7|1|A|G|2019
7OF7|1|A|U|2020
7OF7|1|A|U|2021
7OF7|1|A|G|2022
*
7OF7|1|A|C|2271
7OF7|1|A|C|2272
7OF7|1|A|A|2273
7OF7|1|A|A|2274
7OF7|1|A|U|2275
*
7OF7|1|A|A|2290
7OF7|1|A|A|2291
7OF7|1|A|G|2292
7OF7|1|A|A|2293
7OF7|1|A|A|2294
7OF7|1|A|C|2295
7OF7|1|A|U|2296
7OF7|1|A|A|2297
7OF7|1|A|A|2298
7OF7|1|A|U|2299
7OF7|1|A|G|2300
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain b
- 39S ribosomal protein L43, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: