J5_7OID_002
3D structure
- PDB id
- 7OID (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUAGAAAUAAC*GACCC*GUUG*CCAAU*AAGAACUAAUG
- Length
- 36 nucleotides
- Bulged bases
- 7OID|1|A|A|199, 7OID|1|A|G|622, 7OID|1|A|U|629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OID|1|A|C|195
7OID|1|A|U|196
7OID|1|A|A|197
7OID|1|A|G|198
7OID|1|A|A|199
7OID|1|A|A|200
7OID|1|A|A|201
7OID|1|A|U|202
7OID|1|A|A|203
7OID|1|A|A|204
7OID|1|A|C|205
*
7OID|1|A|G|229
7OID|1|A|A|230
7OID|1|A|C|231
7OID|1|A|C|232
7OID|1|A|C|233
*
7OID|1|A|G|349
7OID|1|A|U|350
7OID|1|A|U|351
7OID|1|A|G|352
*
7OID|1|A|C|601
7OID|1|A|C|602
7OID|1|A|A|603
7OID|1|A|A|604
7OID|1|A|U|605
*
7OID|1|A|A|620
7OID|1|A|A|621
7OID|1|A|G|622
7OID|1|A|A|623
7OID|1|A|A|624
7OID|1|A|C|625
7OID|1|A|U|626
7OID|1|A|A|627
7OID|1|A|A|628
7OID|1|A|U|629
7OID|1|A|G|630
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain b
- 39S ribosomal protein L43, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: